Я недавно установил пакет PBSadmb в R и запустил следующую командную строку.
compAD('vonb')
vonb - мое имя файла
Я думаю, что функция compAD требует, чтобы внутри находился findstr.exe, но я выдал ошибки вместо того, чтобы работать.
Так что я погуглил, чтобы решить эту проблему, и нашел тот же вопрос по этой же теме (хотя он / она использовал другую программу)
вопрос
читая предложения на этой странице, я добавил новый путь "C: \ Windows \ System32" к пути на вкладке переменных среды в свойствах системы.
Но ничего не изменилось.
Может кто-нибудь пролить мне свет на эту проблему?
Спасибо!
Вот мой код.
###PBSadmb user's guide! ###180910
getwd()
setwd("E:/ADMB/PBSadmb_exercise/vonb")
getwd()
#check the gcc and programs for your code!
Sys.getenv()["PATH"]
#load package
require(PBSadmb)
#set the path of the programs (admb, gcc, editor)
setupAD('NewADPaths.txt') #NewADPaths should be in the right directory!
#checkADopts()
convAD('vonb') #convert *.tpl to *.cpp
compAD('vonb') #compile the *.cpp file just created
А это сообщения об ошибках
> compAD('vonb')
"adcomp.cmd vonb"
'findstr' is not recognized as an internal or external command,
operable program or batch file.
'findstr' is not recognized as an internal or external command,
operable program or batch file.
'findstr' is not recognized as an internal or external command,
operable program or batch file.
'findstr' is not recognized as an internal or external command,
operable program or batch file.
*** Compile: vonb.cpp
g++ -c -O3 -fpermissive -I. -I"C:\Program Files (x86)\ADMB\include" -I"C:\Program Files (x86)\ADMB\contrib\include" -o vonb.obj vonb.cpp
In file included from C:\Program Files (x86)\ADMB\include/integrate.hpp:35:0,
from C:\Program Files (x86)\ADMB\include/integrate_wrap.hpp:6,
from C:\Program Files (x86)\ADMB\include/df1b2fun.h:101,
from C:\Program Files (x86)\ADMB\include/Vectorize.hpp:11,
from C:\Program Files (x86)\ADMB\include/admodel.h:2937,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp: In function 'void gauss_kronrod::rdqagie(integr_fn, void*, Float*, int*, Float*, Float*, int*, Float*, Float*, int*, int*, Float*, Float*, Float*, Float*, int*, int*)':
C:\Program Files (x86)\ADMB\include/integrate.cpp:261:17: error: expected unqualified-id before '=' token
Float small = 0.0, erro12;
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:584:2: error: 'erro12' was not declared in this scope
erro12 = error1 + error2;
^~~~~~
C:\Program Files (x86)\ADMB\include/integrate.cpp:654:12: error: expected unqualified-id before '=' token
small = .375;
^
In file included from c:\mingw\include\wtypes.h:2:0,
from c:\mingw\include\unknwn.h:15,
from c:\mingw\include\commdlg.h:470,
from c:\mingw\include\windows.h:68,
from C:\Program Files (x86)\ADMB\include/fvar.hpp:8760,
from C:\Program Files (x86)\ADMB\include/admodel.h:59,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp:662:22: error: expected primary-expression before 'char'
if (fabs(b1 - a1) > small) {
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:662:22: error: expected ')' before 'char'
C:\Program Files (x86)\ADMB\include/integrate.cpp:670:48: error: expected primary-expression before 'char'
if (fabs(blist[maxerr] - alist[maxerr]) > small) {
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:670:48: error: expected ')' before 'char'
C:\Program Files (x86)\ADMB\include/integrate.cpp:691:45: error: expected primary-expression before 'char'
if (fabs(blist[maxerr] - alist[maxerr]) > small) {
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:691:45: error: expected ')' before 'char'
In file included from C:\Program Files (x86)\ADMB\include/integrate.hpp:35:0,
from C:\Program Files (x86)\ADMB\include/integrate_wrap.hpp:6,
from C:\Program Files (x86)\ADMB\include/df1b2fun.h:101,
from C:\Program Files (x86)\ADMB\include/Vectorize.hpp:11,
from C:\Program Files (x86)\ADMB\include/admodel.h:2937,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp:731:8: error: expected unqualified-id before '*=' token
small *= .5;
^~
In file included from c:\mingw\include\wtypes.h:2:0,
from c:\mingw\include\unknwn.h:15,
from c:\mingw\include\commdlg.h:470,
from c:\mingw\include\windows.h:68,
from C:\Program Files (x86)\ADMB\include/fvar.hpp:8760,
from C:\Program Files (x86)\ADMB\include/admodel.h:59,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp: In function 'void gauss_kronrod::rdqagse(integr_fn, void*, Float*, Float*, Float*, Float*, int*, Float*, Float*, int*, int*, Float*, Float*, Float*, Float*, int*, int*)':
C:\Program Files (x86)\ADMB\include/integrate.cpp:998:53: error: expected unqualified-id before 'char'
Float correc = 0.0, erlarg = 0.0, ertest = 0.0, small = 0.0;
^
In file included from C:\Program Files (x86)\ADMB\include/integrate.hpp:35:0,
from C:\Program Files (x86)\ADMB\include/integrate_wrap.hpp:6,
from C:\Program Files (x86)\ADMB\include/df1b2fun.h:101,
from C:\Program Files (x86)\ADMB\include/Vectorize.hpp:11,
from C:\Program Files (x86)\ADMB\include/admodel.h:2937,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp:1359:12: error: expected unqualified-id before '=' token
small = fabs(*b - *a) * .375;
^
In file included from c:\mingw\include\wtypes.h:2:0,
from c:\mingw\include\unknwn.h:15,
from c:\mingw\include\commdlg.h:470,
from c:\mingw\include\windows.h:68,
from C:\Program Files (x86)\ADMB\include/fvar.hpp:8760,
from C:\Program Files (x86)\ADMB\include/admodel.h:59,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp:1367:22: error: expected primary-expression before 'char'
if (fabs(b1 - a1) > small) {
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:1367:22: error: expected ')' before 'char'
C:\Program Files (x86)\ADMB\include/integrate.cpp:1375:48: error: expected primary-expression before 'char'
if (fabs(blist[maxerr] - alist[maxerr]) > small) {
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:1375:48: error: expected ')' before 'char'
C:\Program Files (x86)\ADMB\include/integrate.cpp:1396:45: error: expected primary-expression before 'char'
if (fabs(blist[maxerr] - alist[maxerr]) > small) {
^
C:\Program Files (x86)\ADMB\include/integrate.cpp:1396:45: error: expected ')' before 'char'
In file included from C:\Program Files (x86)\ADMB\include/integrate.hpp:35:0,
from C:\Program Files (x86)\ADMB\include/integrate_wrap.hpp:6,
from C:\Program Files (x86)\ADMB\include/df1b2fun.h:101,
from C:\Program Files (x86)\ADMB\include/Vectorize.hpp:11,
from C:\Program Files (x86)\ADMB\include/admodel.h:2937,
from vonb.cpp:7:
C:\Program Files (x86)\ADMB\include/integrate.cpp:1435:8: error: expected unqualified-id before '*=' token
small *= .5;
^~
Error: Unable to build vonb.cpp to vonb.obj
Error: Unable to build.
COMSPEC=C:\Windows\system32\cmd.exe.
PATH=C:\Program Files (x86)\ADMB\bin;C:\Program Files (x86)\ADMB\utilities\mingw\bin;C:\Program Files (x86)\ADMB\bin;C:\MinGW\msys\bin;C:\MinGW\bin.
ADMB_HOME: C:\Program Files (x86)\ADMB