У меня есть этот CSV-файл , где я пытаюсь предсказать Histology
на основе данных в других строках.
У меня есть код, показанный ниже, чтобы сделать это,Тем не менее, я получаю все прогнозы как 1
.Это почему?Хотя точность, которую я получаю после тренировки, составляет 86.81%
.
import numpy as np
import pandas as pd
from keras.layers import Dense, Dropout, BatchNormalization, Activation
import keras.models as md
import keras.layers.core as core
import keras.utils.np_utils as kutils
import keras.layers.convolutional as conv
from keras.layers import MaxPool2D
from subprocess import check_output
dataset = pd.read_csv('mutation-train.csv')
dataset = dataset[['CDS_Mutation',
'Primary_Tissue',
'Genomic',
'Gene_ID',
'Official_Symbol',
'Histology']]
X = dataset.iloc[:,0:5].values
y = dataset.iloc[:,5].values
# Encoding categorical data
from sklearn.preprocessing import LabelEncoder, OneHotEncoder
labelencoder_X_0 = LabelEncoder()
X[:, 0] = labelencoder_X_0.fit_transform(X[:, 0])
labelencoder_X_1 = LabelEncoder()
X[:, 1] = labelencoder_X_1.fit_transform(X[:, 1])
labelencoder_X_2= LabelEncoder()
X[:, 2] = labelencoder_X_2.fit_transform(X[:, 2])
labelencoder_X_4= LabelEncoder()
X[:, 4] = labelencoder_X_4.fit_transform(X[:, 4])
X = X.astype(float)
labelencoder_y= LabelEncoder()
y = labelencoder_y.fit_transform(y)
onehotencoder0 = OneHotEncoder(categorical_features = [0])
X = onehotencoder0.fit_transform(X).toarray()
X = X[:,0:]
onehotencoder1 = OneHotEncoder(categorical_features = [1])
X = onehotencoder1.fit_transform(X).toarray()
X = X[:,0:]
onehotencoder2 = OneHotEncoder(categorical_features = [2])
X = onehotencoder2.fit_transform(X).toarray()
X = X[:,0:]
onehotencoder4 = OneHotEncoder(categorical_features = [4])
X = onehotencoder4.fit_transform(X).toarray()
X = X[:,0:]
# Splitting the dataset training and test sets
from sklearn.model_selection import train_test_split
X_train, X_test, y_train, y_test = train_test_split(X,y,test_size=0.2)
# Feature scaling
from sklearn.preprocessing import StandardScaler
sc = StandardScaler()
X_train = sc.fit_transform(X_train)
X_test = sc.transform(X_test)
# Evaluating the ANN
from sklearn.model_selection import cross_val_score
from keras.models import Sequential
from keras.layers import Dense
from keras.layers import Dropout
model=Sequential()
model.add(Dense(32, activation = 'relu', input_shape=(X.shape[1],)))
model.add(Dense(16, activation = 'relu'))
model.add(Dense(1, activation='sigmoid'))
model.compile(optimizer = 'adam', loss = 'binary_crossentropy', metrics = ["accuracy"])
# Compile model
model.compile(loss='binary_crossentropy', optimizer='rmsprop', metrics=['accuracy'])
# Fit the model
model.fit(X,y, epochs=3, batch_size=1)
# Evaluate the model
scores = model.evaluate(X,y)
print("\n%s: %.2f%%" % (model.metrics_names[1], scores[1]*100))
# Calculate predictions
predictions = model.predict(X)
prediction = pd.DataFrame(predictions,columns=['predictions']).to_csv('prediction.csv')
Спасибо.