Расстояние в R, низкое значение AI C, но ноль и выходы NA - PullRequest
0 голосов
/ 02 февраля 2020

Я пытаюсь проанализировать вероятность обнаружения птицы, используя пакет «Дистанция» в R. Я разделил обнаружение по классу размера птицы: маленький и средний. Большой по весу, потому что обнаружение отдельных видов было низким. Ниже приведен класс маленьких птиц на 26 различных участках, которые варьируются в 4 различных типах среды обитания: сельское хозяйство, лес, кустарник, луг. У меня есть более высокие, но приличные значения AI C с некоторыми из моих выходов (Пример 1), а более низкие формулы значений AI C дают NA и нулевые выходы (Пример 2). Попытка устранить неполадки и выяснить, что не так. Тип овощей = категория, среднегодовое количество осадков = непрерывно. Я также включил свой вывод без каких-либо переменных (Пример 3). Разве нельзя использовать непрерывную переменную как фактор? Потому что выходы имеют низкий AIC с NA и нулями (Пример 4). Я ценю любые рекомендации или рекомендации. Заранее спасибо!

> head(det_small3)
  Region.Label Sample.Label Effort distance size Species vegheight canopy weight meanannualrainfall elevation ground avgtempf     vegtype
1  agriculture            5      1       35   15   small      0.35      0   17.9              409.9     31.09     80       78 agriculture
2  agriculture            5      1       40    6   small      0.35      0   17.9              409.9     31.09     80       78 agriculture
3  agriculture            5      1       45    4   small      0.35      0   17.9              409.9     31.09     80       78 agriculture
4  agriculture            5      1       40    5   small      0.35      0   17.9              409.9     31.09     80       78 agriculture
5  agriculture            5      1       45   10   small      0.35      0   17.9              409.9     31.09     80       78 agriculture
6  agriculture            5      1       30    2   small      0.35      0   17.9              409.9     31.09     80       78 agriculture

> tail(det_small3)
    Region.Label Sample.Label Effort distance size Species vegheight canopy weight meanannualrainfall elevation ground avgtempf   vegtype
237    grassland           26      1       60   30   small       0.7      0   17.9             1249.7       341     70     73.0 grassland
238    grassland           26      1       40    3   small       0.7      0   17.9             1249.7       341     70     73.0 grassland
239    grassland           26      1       70    3   small       0.7      0   17.9             1249.7       341     70     73.0 grassland
240    grassland           26      1       80    2   small       0.7      0   17.9             1249.7       341     70     73.0 grassland
241    grassland           26      1       30    3   small       0.7      0   17.9             1249.7       341     70     73.0 grassland
242    shrubland           15      1       NA   NA   small       0.5      0     na             1177.5      2673     50     52.9 shrubland


 dput(det_small3)structure(list(Region.Label = structure(c(1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 
3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 3L), .Label = c("agriculture", 
"forest", "shrubland", "grassland"), class = "factor"), Area = c(0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0), Sample.Label = structure(c(5L, 
5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 10L, 10L, 10L, 10L, 10L, 
10L, 10L, 10L, 10L, 10L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 
12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 
12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 12L, 13L, 13L, 
13L, 13L, 13L, 13L, 13L, 13L, 13L, 13L, 13L, 13L, 13L, 13L, 13L, 
19L, 19L, 19L, 19L, 19L, 19L, 19L, 19L, 19L, 19L, 21L, 21L, 21L, 
21L, 21L, 21L, 21L, 21L, 23L, 23L, 23L, 23L, 23L, 23L, 23L, 23L, 
23L, 23L, 23L, 23L, 23L, 23L, 6L, 6L, 6L, 7L, 7L, 7L, 7L, 7L, 
7L, 7L, 7L, 7L, 7L, 9L, 9L, 9L, 9L, 9L, 11L, 11L, 11L, 11L, 11L, 
11L, 11L, 11L, 11L, 11L, 11L, 11L, 11L, 11L, 11L, 11L, 11L, 11L, 
11L, 11L, 16L, 16L, 16L, 16L, 16L, 16L, 16L, 16L, 16L, 16L, 16L, 
16L, 16L, 18L, 18L, 18L, 20L, 20L, 20L, 20L, 24L, 24L, 24L, 24L, 
24L, 24L, 24L, 24L, 24L, 24L, 24L, 24L, 24L, 1L, 1L, 2L, 2L, 
2L, 2L, 2L, 22L, 22L, 22L, 22L, 22L, 22L, 3L, 3L, 3L, 3L, 3L, 
4L, 4L, 4L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 8L, 
8L, 14L, 14L, 14L, 14L, 17L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 
25L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 25L, 
25L, 26L, 26L, 26L, 26L, 26L, 26L, 26L, 26L, 26L, 15L), .Label = c("1", 
"2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", 
"14", "15", "16", "17", "18", "19", "20", "21", "22", "23", "24", 
"25", "26"), class = "factor"), Effort = c(1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 
1, 1, 1, 1, 1), distance = c(35, 40, 45, 40, 45, 30, 45, 75, 
55, 65, 80, 50, 50, 10, 30, 20, 30, 20, 30, 40, 150, 30, 40, 
10, 10, 15, 20, 20, 30, 50, 20, 40, 25, 30, 30, 50, 50, 20, 20, 
20, 40, 5, 20, 20, 20, 20, 30, 5, 10, 30, 20, 10, 30, 20, 10, 
30, 15, 20, 25, 10, 20, 40, 15, 20, 30, 40, 20, 30, 30, 30, 30, 
30, 100, 30, 30, 30, 10, 40, 30, 60, 90, 40, 80, 40, 30, 45, 
15, 20, 70, 80, 60, 30, 100, 80, 50, 40, 60, 30, 30, 40, 60, 
70, 55, 35, 40, 50, 45, 40, 45, 35, 35, 30, 40, 10, 6, 10, 5, 
15, 20, 30, 15, 40, 20, 25, 20, 30, 40, 20, 25, 15, 30, 25, 30, 
30, 25, 20, 20, 25, 50, 40, 50, 30, 50, 50, 50, 30, 60, 60, 80, 
60, 80, 30, 100, 60, 25, 50, 30, 20, 30, 40, 20, 30, 20, 30, 
50, 40, 30, 40, 30, 20, 30, 60, 50, 20, 50, 55, 35, 55, 15, 30, 
10, 50, 60, 80, 40, 35, 35, 50, 40, 30, 25, 30, 50, 50, 40, 30, 
50, 50, 30, 200, 200, 100, 100, 100, 150, 100, 30, 40, 30, 20, 
70, 40, 40, 60, 60, 30, 50, 50, 30, 50, 60, 80, 90, 30, 60, 80, 
40, 100, 50, 40, 35, 20, 60, 90, 40, 50, 60, 40, 70, 80, 30, 
NA), size = c(15, 6, 4, 5, 10, 2, 2, 4, 2, 10, 3, 3, 3, 3, 11, 
2, 2, 1, 2, 6, 4, 2, 1, 6, 2, 8, 2, 2, 1, 3, 2, 3, 2, 5, 2, 6, 
6, 14, 6, 2, 4, 2, 2, 2, 5, 4, 5, 2, 4, 12, 1, 8, 3, 3, 12, 4, 
2, 6, 6, 6, 2, 7, 2, 8, 10, 1, 14, 2, 3, 1, 2, 2, 3, 2, 2, 4, 
3, 4, 2, 8, 1, 4, 1, 2, 8, 15, 8, 5, 9, 8, 2, 2, 3, 2, 8, 2, 
1, 3, 2, 2, 2, 5, 4, 3, 7, 6, 3, 1, 6, 4, 1, 3, 1, 5, 4, 3, 4, 
3, 2, 2, 2, 2, 2, 2, 1, 1, 2, 2, 2, 1, 2, 5, 2, 1, 2, 3, 3, 9, 
8, 5, 2, 2, 2, 2, 2, 3, 4, 6, 4, 2, 2, 3, 2, 2, 6, 1, 1, 1, 1, 
1, 4, 2, 6, 1, 1, 4, 4, 2, 3, 3, 3, 8, 2, 3, 4, 2, 4, 1, 1, 2, 
1, 1, 1, 1, 2, 10, 4, 4, 2, 10, 3, 3, 2, 5, 6, 2, 2, 2, 1, 5, 
2, 1, 2, 1, 1, 1, 6, 4, 4, 4, 2, 2, 2, 2, 3, 2, 2, 3, 3, 2, 8, 
2, 1, 2, 2, 1, 2, 2, 3, 6, 1, 8, 3, 12, 10, 15, 30, 3, 3, 2, 
3, NA), Species = structure(c(2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L), .Label = c("medium.large", 
"small", "raptor"), class = "factor"), vegheight = c(0.35, 0.35, 
0.35, 0.35, 0.35, 0.35, 0.35, 0.35, 0.35, 0.35, 0.35, 0.2, 0.2, 
0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.4, 0.4, 0.4, 0.4, 0.4, 
0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 
0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 
0.4, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 
0.25, 0.25, 0.25, 0.25, 0.25, 0.725, 0.725, 0.725, 0.725, 0.725, 
0.725, 0.725, 0.725, 0.725, 0.725, 0.45, 0.45, 0.45, 0.45, 0.45, 
0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 
0.45, 0.45, 0.45, 0.45, 0.45, 0.45, 2.93, 2.93, 2.93, 9, 9, 9, 
9, 9, 9, 9, 9, 9, 9, 5, 5, 5, 5, 5, 20, 20, 20, 20, 20, 20, 20, 
20, 20, 20, 20, 20, 20, 20, 20, 20, 20, 20, 20, 20, 0.4, 0.4, 
0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 6, 6, 
6, 0.5, 0.5, 0.5, 0.5, 8.3, 8.3, 8.3, 8.3, 8.3, 8.3, 8.3, 8.3, 
8.3, 8.3, 8.3, 8.3, 8.3, 0.3, 0.3, 0.43, 0.43, 0.43, 0.43, 0.43, 
0.55, 0.55, 0.55, 0.55, 0.55, 0.55, 0.55, 0.55, 0.55, 0.55, 0.55, 
0.2, 0.2, 0.2, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 
0.1, 0.1, 0.1, 0.1, 0.11, 0.11, 0.11, 0.11, 0.3, 0.15, 0.15, 
0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 
0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.7, 0.7, 0.7, 
0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.5), canopy = c(0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 5, 5, 5, 5, 5, 
5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 
5, 5, 5, 5, 5, 5, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 85, 85, 85, 90, 
90, 90, 90, 90, 90, 90, 90, 90, 90, 60, 60, 60, 60, 60, 75, 75, 
75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 
75, 75, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 65, 65, 65, 0, 
0, 0, 0, 65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 10, 10, 10, 10, 5, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 
0, 0, 0, 0, 0, 0, 0, 0, 0, 0), weight = structure(c(1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L), .Label = c("17.9", 
"na"), class = "factor"), meanannualrainfall = c(409.9, 409.9, 
409.9, 409.9, 409.9, 409.9, 409.9, 409.9, 409.9, 409.9, 409.9, 
467.5, 467.5, 467.5, 467.5, 467.5, 467.5, 467.5, 467.5, 467.5, 
467.5, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 
306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 
306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 
306.8, 306.8, 306.8, 306.8, 306.8, 306.8, 320.7, 320.7, 320.7, 
320.7, 320.7, 320.7, 320.7, 320.7, 320.7, 320.7, 320.7, 320.7, 
320.7, 320.7, 320.7, 409.9, 409.9, 409.9, 409.9, 409.9, 409.9, 
409.9, 409.9, 409.9, 409.9, 376.6, 376.6, 376.6, 376.6, 376.6, 
376.6, 376.6, 376.6, 352.4, 352.4, 352.4, 352.4, 352.4, 352.4, 
352.4, 352.4, 352.4, 352.4, 352.4, 352.4, 352.4, 352.4, 2044.1, 
2044.1, 2044.1, 918.3, 918.3, 918.3, 918.3, 918.3, 918.3, 918.3, 
918.3, 918.3, 918.3, 2004.5, 2004.5, 2004.5, 2004.5, 2004.5, 
1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 
1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 1842.8, 
1842.8, 1842.8, 1842.8, 1842.8, 808, 808, 808, 808, 808, 808, 
808, 808, 808, 808, 808, 808, 808, 3550.6, 3550.6, 3550.6, 797.7, 
797.7, 797.7, 797.7, 1352.1, 1352.1, 1352.1, 1352.1, 1352.1, 
1352.1, 1352.1, 1352.1, 1352.1, 1352.1, 1352.1, 1352.1, 1352.1, 
1008, 1008, 1008, 1008, 1008, 1008, 1008, 1012.9, 1012.9, 1012.9, 
1012.9, 1012.9, 1012.9, 634.4, 634.4, 634.4, 634.4, 634.4, 1371, 
1371, 1371, 734.2, 734.2, 734.2, 734.2, 734.2, 734.2, 734.2, 
734.2, 734.2, 734.2, 734.2, 734.2, 734.2, 734.2, 525.8, 525.8, 
525.8, 525.8, 718.9, 677.8, 677.8, 677.8, 677.8, 677.8, 677.8, 
677.8, 677.8, 677.8, 677.8, 677.8, 677.8, 677.8, 677.8, 677.8, 
677.8, 677.8, 677.8, 677.8, 677.8, 677.8, 1249.7, 1249.7, 1249.7, 
1249.7, 1249.7, 1249.7, 1249.7, 1249.7, 1249.7, 1177.5), elevation = c(31.09, 
31.09, 31.09, 31.09, 31.09, 31.09, 31.09, 31.09, 31.09, 31.09, 
31.09, 335.28, 335.28, 335.28, 335.28, 335.28, 335.28, 335.28, 
335.28, 335.28, 335.28, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 
11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 11, 
11, 11, 11, 11, 11, 11, 78.02, 78.02, 78.02, 78.02, 78.02, 78.02, 
78.02, 78.02, 78.02, 78.02, 78.02, 78.02, 78.02, 78.02, 78.02, 
52, 52, 52, 52, 52, 52, 52, 52, 52, 52, 182, 182, 182, 182, 182, 
182, 182, 182, 44, 44, 44, 44, 44, 44, 44, 44, 44, 44, 44, 44, 
44, 44, 27.13, 27.13, 27.13, 1981.2, 1981.2, 1981.2, 1981.2, 
1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 746.76, 746.76, 
746.76, 746.76, 746.76, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 
1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 
1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1981.2, 1433, 
1433, 1433, 1433, 1433, 1433, 1433, 1433, 1433, 1433, 1433, 1433, 
1433, 73, 73, 73, 1343, 1343, 1343, 1343, 396, 396, 396, 396, 
396, 396, 396, 396, 396, 396, 396, 396, 396, 1828.8, 1828.8, 
2194.56, 2194.56, 2194.56, 2194.56, 2194.56, 2569, 2569, 2569, 
2569, 2569, 2569, 502.92, 502.92, 502.92, 502.92, 502.92, 944.88, 
944.88, 944.88, 667.5, 667.5, 667.5, 667.5, 667.5, 667.5, 667.5, 
667.5, 667.5, 667.5, 667.5, 667.5, 667.5, 667.5, 359.05, 359.05, 
359.05, 359.05, 986, 690, 690, 690, 690, 690, 690, 690, 690, 
690, 690, 690, 690, 690, 690, 690, 690, 690, 690, 690, 690, 690, 
341, 341, 341, 341, 341, 341, 341, 341, 341, 2673), ground = c(80, 
80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 70, 70, 70, 70, 70, 70, 
70, 70, 70, 70, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 
50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 50, 
50, 50, 50, 50, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 75, 
75, 75, 75, 10, 10, 10, 10, 10, 10, 10, 10, 10, 10, 75, 75, 75, 
75, 75, 75, 75, 75, 70, 70, 70, 70, 70, 70, 70, 70, 70, 70, 70, 
70, 70, 70, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 
90, 90, 90, 90, 90, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 
80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 80, 
80, 80, 80, 80, 80, 80, 95, 95, 95, 73, 73, 73, 73, 100, 100, 
100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 80, 80, 
60, 60, 60, 60, 60, 40, 40, 40, 40, 40, 40, 85, 85, 85, 85, 85, 
95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 95, 
95, 35, 35, 35, 35, 75, 65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 
65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 65, 70, 70, 70, 70, 70, 
70, 70, 70, 70, 50), avgtempf = c(78, 78, 78, 78, 78, 78, 78, 
78, 78, 78, 78, 77.5, 77.5, 77.5, 77.5, 77.5, 77.5, 77.5, 77.5, 
77.5, 77.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 
80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 
80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 80.5, 
80.5, 79.5, 79.5, 79.5, 79.5, 79.5, 79.5, 79.5, 79.5, 79.5, 79.5, 
79.5, 79.5, 79.5, 79.5, 79.5, 80.6, 80.6, 80.6, 80.6, 80.6, 80.6, 
80.6, 80.6, 80.6, 80.6, 78.4, 78.4, 78.4, 78.4, 78.4, 78.4, 78.4, 
78.4, 77, 77, 77, 77, 77, 77, 77, 77, 77, 77, 77, 77, 77, 77, 
76, 76, 76, 58, 58, 58, 58, 58, 58, 58, 58, 58, 58, 68.5, 68.5, 
68.5, 68.5, 68.5, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 
54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 54.3, 
54.3, 65.5, 65.5, 65.5, 65.5, 65.5, 65.5, 65.5, 65.5, 65.5, 65.5, 
65.5, 65.5, 65.5, 74.5, 74.5, 74.5, 65, 65, 65, 65, 78, 78, 78, 
78, 78, 78, 78, 78, 78, 78, 78, 78, 78, 65, 65, 65, 65, 65, 65, 
65, 50, 50, 50, 50, 50, 50, 69, 69, 69, 69, 69, 66, 66, 66, 65.8, 
65.8, 65.8, 65.8, 65.8, 65.8, 65.8, 65.8, 65.8, 65.8, 65.8, 65.8, 
65.8, 65.8, 74.3, 74.3, 74.3, 74.3, 67.4, 75.5, 75.5, 75.5, 75.5, 
75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 
75.5, 75.5, 75.5, 75.5, 75.5, 75.5, 73, 73, 73, 73, 73, 73, 73, 
73, 73, 52.9), vegtype = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 
2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 
3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 3L), .Label = c("agriculture", 
"forest", "shrubland", "grassland"), class = "factor")), class = "data.frame", row.names = c(NA, 
-242L))

Пример 1:

detect_hrvegtype $ dht $ индивидуальный $ резюме

    Region     Area CoveredArea Effort   n       ER     se.ER     cv.ER mean.size   se.mean
1 agriculture 198470.1    198470.1      7 428 61.14286 13.698155 0.2240352  4.412371 0.3501204

2      forest 198470.1    226823.0      8 206 25.75000  5.936419 0.2305405  2.942857 0.2162026

3   shrubland 198470.1    113411.5      4  31  7.75000  2.954516 0.3812279  2.384615 0.5608883

4   grassland 198470.1    198470.1      7 216 30.85714 10.479978 0.3396289  4.408163 0.6912465

5       Total 793880.5    737174.7     26 881 33.88462  5.961241 0.1759276  3.847162 0.2262063

Пример 2:

detect_hrcosmeanannualrainfall $ dht $ индивидуумов $ итоговый NULL

сводка (detect_hrcosmeanannualrainfall)

Summary for distance analysis 

Number of observations :  229 

Distance range         :  0  -  95 

Model : Hazard-rate key function 

AIC   : 6 

Detection function parameters

Scale coefficient(s):  

                    estimate se

(Intercept)         3.108856 NA

meanannualrainfall -1.000038 NA

Shape coefficient(s):  

estimate se

(Intercept) 0.8765737 NA

                    Estimate SE CV

Average p                  0 NA NA

N in covered region      Inf NA NA

Пример 3:

резюме (detect_hrcos)

Summary for distance analysis 

Number of observations :  229 

Distance range         :  0  -  95 

Model : Hazard-rate key function 

AIC   : 1954.596 

Detection function parameters

Scale coefficient(s):  

            estimate         se

(Intercept) 3.645371 0.06451175

Shape coefficient(s):  

            estimate        se

(Intercept) 1.461591 0.1104191

                       Estimate          SE        CV

Average p             0.2519536  0.02109612 0.0837302

N in covered region 908.8975475 92.14143419 0.1013771

Summary for clusters

Summary statistics:

       Region     Area CoveredArea Effort   n  k        ER    se.ER     cv.ER

1 agriculture 198470.1    198470.1      7  97  7 13.857143 3.165503 0.2284383

2      forest 198470.1    226823.0      8  70  8  8.750000 2.234071 0.2553224

3   shrubland 198470.1    113411.5      4  13  4  3.250000 1.376893 0.4236593

4   grassland 198470.1    198470.1      7  49  7  7.000000 2.380476 0.3400680

5       Total 793880.5    737174.7     26 229 26  8.807692 1.406599 0.1597012

Density:

        Label     Estimate           se        cv          lcl         ucl        df

1 agriculture 0.0019397960 0.0004719521 0.2432999 0.0011118509 0.003384274  7.716770

2      forest 0.0012248712 0.0003291242 0.2687010 0.0006710625 0.002235722  8.583516

3   shrubland 0.0004549522 0.0001964729 0.4318541 0.0001286891 0.001608384  3.238871

4   grassland 0.0009798970 0.0003431836 0.3502242 0.0004357316 0.002203646  6.748863

5       Total 0.0011498791 0.0001921382 0.1670942 0.0008205686 0.001611348 33.532371

Summary for individuals

Summary statistics:

       Region     Area CoveredArea Effort   n       ER     se.ER     cv.ER mean.size   se.mean

1 agriculture 198470.1    198470.1      7 428 61.14286 13.698155 0.2240352  4.412371 0.3501204

2      forest 198470.1    226823.0      8 206 25.75000  5.936419 0.2305405  2.942857 0.2162026

3   shrubland 198470.1    113411.5      4  31  7.75000  2.954516 0.3812279  2.384615 0.5608883

4   grassland 198470.1    198470.1      7 216 30.85714 10.479978 0.3396289  4.408163 0.6912465

5       Total 793880.5    737174.7     26 881 33.88462  5.961241 0.1759276  3.847162 0.2262063

Density:

        Label    Estimate           se        cv          lcl         ucl        df

1 agriculture 0.008559100 0.0020470844 0.2391705 0.0049557369 0.014782502  7.789194

2      forest 0.003604621 0.0008841224 0.2452747 0.0020857164 0.006229654  8.963693

3   shrubland 0.001084886 0.0004234468 0.3903146 0.0003470734 0.003391149  3.296311

4   grassland 0.004319546 0.0015109678 0.3497979 0.0019226637 0.009704492  6.750856

5       Total 0.004392038 0.0007439172 0.1693786 0.0031064619 0.006209636 25.098525

Expected cluster size

       Region Expected.S se.Expected.S cv.Expected.S

1 agriculture   4.412371     0.3659490    0.08293704

2      forest   2.942857     0.2285997    0.07767953

3   shrubland   2.384615     0.8192792    0.34356868

4   grassland   4.408163     1.1686187    0.26510331

5       Total   3.819565     0.3229394    0.08454874

Пример 4:

detect_hrcoselevation<- ds(det_small3, truncation = 95, transect = "point", key = "hr", formula = 
~elevation) #AIC=-382

detect_hrcosmeanannualrainfall<- ds(det_small3, truncation = 95, transect = "point", key = "hr", formula = ~meanannualrainfall) #AIC=6

detect_hrcosmeanannualrainfallvegheight<- ds(det_small3, truncation = 95, transect = "point", key = "hr", formula = ~meanannualrainfall+vegheight) #AIC=8
...