Я попытался установить "tidyverse" (и многие другие пакеты), и это не сработало !! Я гуглил и прочитал кучу решений, которые люди давали для подобных проблем, и я попробовал их (например, перезагружаем R, Rstudio; go для инструмента> глобальный параметр и снимаем галочку с http; et c.), Но они этого не сделали тоже не работает. Ниже приведено то, что я вижу при попытке:
R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin15.6.0 (64-bit)
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Type 'contributors()' for more information and
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> install.packages("tidyverse")
also installing the dependencies ‘markdown’, ‘rlang’, ‘knitr’, ‘base64enc’, ‘tidyselect’, ‘Rcpp’, ‘isoband’, ‘vctrs’, ‘fs’, ‘rmarkdown’, ‘broom’, ‘dbplyr’, ‘dplyr’, ‘ggplot2’, ‘haven’, ‘hms’, ‘lubridate’, ‘modelr’, ‘reprex’, ‘tidyr’, ‘xml2’
Warning in install.packages :
unable to access index for repository https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6:
cannot open URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/PACKAGES'
Packages which are only available in source form, and may need compilation of C/C++/Fortran: ‘markdown’ ‘rlang’
‘base64enc’ ‘tidyselect’ ‘Rcpp’ ‘isoband’ ‘vctrs’ ‘fs’ ‘dplyr’ ‘haven’ ‘lubridate’ ‘tidyr’ ‘xml2’
Do you want to attempt to install these from sources? (Yes/no/cancel) yes
installing the source packages ‘markdown’, ‘rlang’, ‘knitr’, ‘base64enc’, ‘tidyselect’, ‘Rcpp’, ‘isoband’, ‘vctrs’, ‘fs’, ‘rmarkdown’, ‘broom’, ‘dbplyr’, ‘dplyr’, ‘ggplot2’, ‘haven’, ‘hms’, ‘lubridate’, ‘modelr’, ‘reprex’, ‘tidyr’, ‘xml2’, ‘tidyverse’
trying URL 'https://cran.rstudio.com/src/contrib/markdown_1.1.tar.gz'
Content type 'application/x-gzip' length 81050 bytes (79 KB)
==================================================
downloaded 79 KB
trying URL 'https://cran.rstudio.com/src/contrib/rlang_0.4.5.tar.gz'
Content type 'application/x-gzip' length 816813 bytes (797 KB)
==================================================
downloaded 797 KB
trying URL 'https://cran.rstudio.com/src/contrib/knitr_1.28.tar.gz'
Content type 'application/x-gzip' length 884866 bytes (864 KB)
==================================================
downloaded 864 KB
trying URL 'https://cran.rstudio.com/src/contrib/base64enc_0.1-3.tar.gz'
Content type 'application/x-gzip' length 7833 bytes
==================================================
downloaded 7833 bytes
trying URL 'https://cran.rstudio.com/src/contrib/tidyselect_1.0.0.tar.gz'
Content type 'application/x-gzip' length 151161 bytes (147 KB)
==================================================
downloaded 147 KB
trying URL 'https://cran.rstudio.com/src/contrib/Rcpp_1.0.4.tar.gz'
Content type 'application/x-gzip' length 2750216 bytes (2.6 MB)
==================================================
downloaded 2.6 MB
trying URL 'https://cran.rstudio.com/src/contrib/isoband_0.2.0.tar.gz'
Content type 'application/x-gzip' length 1894070 bytes (1.8 MB)
==================================================
downloaded 1.8 MB
trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.2.4.tar.gz'
Content type 'application/x-gzip' length 787455 bytes (768 KB)
==================================================
downloaded 768 KB
trying URL 'https://cran.rstudio.com/src/contrib/fs_1.3.2.tar.gz'
Content type 'application/x-gzip' length 820272 bytes (801 KB)
==================================================
downloaded 801 KB
trying URL 'https://cran.rstudio.com/src/contrib/rmarkdown_2.1.tar.gz'
Content type 'application/x-gzip' length 3186382 bytes (3.0 MB)
==================================================
downloaded 3.0 MB
trying URL 'https://cran.rstudio.com/src/contrib/broom_0.5.5.tar.gz'
Content type 'application/x-gzip' length 1223871 bytes (1.2 MB)
==================================================
downloaded 1.2 MB
trying URL 'https://cran.rstudio.com/src/contrib/dbplyr_1.4.2.tar.gz'
Content type 'application/x-gzip' length 303397 bytes (296 KB)
==================================================
downloaded 296 KB
trying URL 'https://cran.rstudio.com/src/contrib/dplyr_0.8.5.tar.gz'
Content type 'application/x-gzip' length 1378766 bytes (1.3 MB)
==================================================
downloaded 1.3 MB
trying URL 'https://cran.rstudio.com/src/contrib/ggplot2_3.3.0.tar.gz'
Content type 'application/x-gzip' length 3031461 bytes (2.9 MB)
==================================================
downloaded 2.9 MB
trying URL 'https://cran.rstudio.com/src/contrib/haven_2.2.0.tar.gz'
Content type 'application/x-gzip' length 272575 bytes (266 KB)
==================================================
downloaded 266 KB
trying URL 'https://cran.rstudio.com/src/contrib/hms_0.5.3.tar.gz'
Content type 'application/x-gzip' length 134669 bytes (131 KB)
==================================================
downloaded 131 KB
trying URL 'https://cran.rstudio.com/src/contrib/lubridate_1.7.4.tar.gz'
Content type 'application/x-gzip' length 449850 bytes (439 KB)
==================================================
downloaded 439 KB
trying URL 'https://cran.rstudio.com/src/contrib/modelr_0.1.6.tar.gz'
Content type 'application/x-gzip' length 121295 bytes (118 KB)
==================================================
downloaded 118 KB
trying URL 'https://cran.rstudio.com/src/contrib/reprex_0.3.0.tar.gz'
Content type 'application/x-gzip' length 1052597 bytes (1.0 MB)
==================================================
downloaded 1.0 MB
trying URL 'https://cran.rstudio.com/src/contrib/tidyr_1.0.2.tar.gz'
Content type 'application/x-gzip' length 812005 bytes (792 KB)
==================================================
downloaded 792 KB
trying URL 'https://cran.rstudio.com/src/contrib/xml2_1.2.5.tar.gz'
Content type 'application/x-gzip' length 273448 bytes (267 KB)
==================================================
downloaded 267 KB
trying URL 'https://cran.rstudio.com/src/contrib/tidyverse_1.3.0.tar.gz'
Content type 'application/x-gzip' length 712837 bytes (696 KB)
==================================================
downloaded 696 KB
* installing *source* package ‘markdown’ ...
** package ‘markdown’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Rbase64.c -o Rbase64.o
clang: warning: no such sysroot directory: '/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk' [-Wmissing-sysroot]
In file included from Rbase64.c:1:
In file included from ./Rmarkdown.h:14:
/Library/Frameworks/R.framework/Resources/include/R.h:55:11: fatal error: 'stdlib.h' file not found
# include <stdlib.h> /* Not used by R itself, but widely assumed in packages */
^~~~~~~~~~
1 error generated.
make: *** [Rbase64.o] Error 1
ERROR: compilation failed for package ‘markdown’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/markdown’
Warning in install.packages :
installation of package ‘markdown’ had non-zero exit status
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./lib/ -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c capture.c -o capture.o
clang: warning: no such sysroot directory: '/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk' [-Wmissing-sysroot]
In file included from capture.c:1:
/Library/Frameworks/R.framework/Resources/include/Rinternals.h:39:11: fatal error: 'stdio.h' file not found
# include <stdio.h>
^~~~~~~~~
1 error generated.
make: *** [capture.o] Error 1
ERROR: compilation failed for package ‘rlang’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rlang’
* restoring previous ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rlang’
Warning in install.packages :
installation of package ‘rlang’ had non-zero exit status
* installing *source* package ‘base64enc’ ...
** package ‘base64enc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c base64.c -o base64.o
clang: warning: no such sysroot directory: '/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk' [-Wmissing-sysroot]
In file included from base64.c:86:
/Library/Frameworks/R.framework/Resources/include/Rinternals.h:39:11: fatal error: 'stdio.h' file not found
# include <stdio.h>
^~~~~~~~~
1 error generated.
make: *** [base64.o] Error 1
ERROR: compilation failed for package ‘base64enc’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/base64enc’
Warning in install.packages :
installation of package ‘base64enc’ had non-zero exit status
* installing *source* package ‘Rcpp’ ...
** package ‘Rcpp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c api.cpp -o api.o
clang: warning: no such sysroot directory: '/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk' [-Wmissing-sysroot]
In file included from api.cpp:24:
In file included from ../inst/include/Rcpp.h:27:
In file included from ../inst/include/RcppCommon.h:29:
In file included from ../inst/include/Rcpp/r/headers.h:67:
In file included from ../inst/include/Rcpp/platform/compiler.h:100:
In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/cmath:305:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/math.h:301:15: fatal error: 'math.h' file not found
#include_next <math.h>
^~~~~~~~
1 error generated.
make: *** [api.o] Error 1
ERROR: compilation failed for package ‘Rcpp’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/Rcpp’
Warning in install.packages :
installation of package ‘Rcpp’ had non-zero exit status
ERROR: dependency ‘markdown’ is not available for package ‘knitr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/knitr’
Warning in install.packages :
installation of package ‘knitr’ had non-zero exit status
ERROR: dependency ‘Rcpp’ is not available for package ‘isoband’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/isoband’
Warning in install.packages :
installation of package ‘isoband’ had non-zero exit status
* installing *source* package ‘vctrs’ ...
** package ‘vctrs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c altrep-rle.c -o altrep-rle.o
clang: warning: no such sysroot directory: '/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk' [-Wmissing-sysroot]
In file included from altrep-rle.c:1:
In file included from ./vctrs.h:6:
/Library/Frameworks/R.framework/Resources/include/R.h:55:11: fatal error: 'stdlib.h' file not found
# include <stdlib.h> /* Not used by R itself, but widely assumed in packages */
^~~~~~~~~~
1 error generated.
make: *** [altrep-rle.o] Error 1
ERROR: compilation failed for package ‘vctrs’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/vctrs’
* restoring previous ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/vctrs’
Warning in install.packages :
installation of package ‘vctrs’ had non-zero exit status
ERROR: dependency ‘Rcpp’ is not available for package ‘fs’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/fs’
Warning in install.packages :
installation of package ‘fs’ had non-zero exit status
ERROR: dependency ‘Rcpp’ is not available for package ‘lubridate’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/lubridate’
Warning in install.packages :
installation of package ‘lubridate’ had non-zero exit status
ERROR: dependency ‘Rcpp’ is not available for package ‘xml2’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/xml2’
Warning in install.packages :
installation of package ‘xml2’ had non-zero exit status
* installing *source* package ‘tidyselect’ ...
** package ‘tidyselect’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
namespace ‘rlang’ 0.4.1 is being loaded, but >= 0.4.3 is required
Calls: <Anonymous> ... withCallingHandlers -> loadNamespace -> namespaceImport -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘tidyselect’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/tidyselect’
Warning in install.packages :
installation of package ‘tidyselect’ had non-zero exit status
ERROR: dependencies ‘knitr’, ‘base64enc’ are not available for package ‘rmarkdown’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rmarkdown’
Warning in install.packages :
installation of package ‘rmarkdown’ had non-zero exit status
ERROR: dependency ‘isoband’ is not available for package ‘ggplot2’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/ggplot2’
Warning in install.packages :
installation of package ‘ggplot2’ had non-zero exit status
* installing *source* package ‘hms’ ...
** package ‘hms’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
namespace ‘vctrs’ 0.2.0 is being loaded, but >= 0.2.1 is required
Calls: <Anonymous> ... withCallingHandlers -> loadNamespace -> namespaceImport -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘hms’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/hms’
* restoring previous ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/hms’
Warning in install.packages :
installation of package ‘hms’ had non-zero exit status
ERROR: dependencies ‘Rcpp’, ‘tidyselect’ are not available for package ‘dplyr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/dplyr’
Warning in install.packages :
installation of package ‘dplyr’ had non-zero exit status
ERROR: dependencies ‘Rcpp’, ‘tidyselect’ are not available for package ‘haven’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/haven’
Warning in install.packages :
installation of package ‘haven’ had non-zero exit status
ERROR: dependencies ‘fs’, ‘rmarkdown’ are not available for package ‘reprex’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/reprex’
Warning in install.packages :
installation of package ‘reprex’ had non-zero exit status
ERROR: dependencies ‘dplyr’, ‘tidyselect’ are not available for package ‘dbplyr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/dbplyr’
Warning in install.packages :
installation of package ‘dbplyr’ had non-zero exit status
ERROR: dependencies ‘dplyr’, ‘Rcpp’, ‘tidyselect’ are not available for package ‘tidyr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/tidyr’
Warning in install.packages :
installation of package ‘tidyr’ had non-zero exit status
ERROR: dependencies ‘dplyr’, ‘tidyr’ are not available for package ‘broom’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/broom’
Warning in install.packages :
installation of package ‘broom’ had non-zero exit status
ERROR: dependencies ‘broom’, ‘dplyr’, ‘tidyr’, ‘tidyselect’ are not available for package ‘modelr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/modelr’
Warning in install.packages :
installation of package ‘modelr’ had non-zero exit status
ERROR: dependencies ‘broom’, ‘dbplyr’, ‘dplyr’, ‘ggplot2’, ‘haven’, ‘lubridate’, ‘modelr’, ‘reprex’, ‘tidyr’, ‘xml2’ are not available for package ‘tidyverse’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/tidyverse’
Warning in install.packages :
installation of package ‘tidyverse’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/y7/cg5_y20s33s9cj5y74v3rzc00000gs/T/RtmpOLLsiu/downloaded_packages’