Почему я сталкиваюсь с ошибкой при вызове метода map () в PySpark? - PullRequest
0 голосов
/ 22 апреля 2020

В настоящее время я оцениваю коллекцию веб-страниц

['page1 page3','page2 page1','page4 page1','page3 page1','page4 page2','page3 page4']

, используя алгоритм PageRank в PySpark, где элементы находятся в формате «source_page target_page». Во-первых, я вывожу своих исходящих соседей в список для каждой страницы, то есть

linksRDD = rdd.map(lambda x:tuple(x.split(" "))).map(lambda x:(x[0],[x[1]])).reduceByKey(lambda x,y:x+y).collect()

linksRDD выглядит так:

[('page1', ['page3']),
 ('page2', ['page1']),
 ('page4', ['page1', 'page2']),
 ('page3', ['page1', 'page4'])]

Затем я приступил к вычислению вклада каждого исходящая ссылка страницы. Сначала я распараллелил linksRDD для создания новой СДР linksRDD_2:

linksRDD_2=sc.parallelize(linksRDD)

Затем я определил функцию computeContribs():

def computeContribs(neighbors, rank):
    for neighbor in neighbors:
        yield (neighbor, rank/len(neighbors))

После этого я попытался запустить следующая строка кода:

for iteration in range(10):
    contribs = linksRDD_2.map(lambda x:computeContribs(x[1],1.0)).collect()

Однако я столкнулся со следующей ошибкой, которую, я подозреваю, можно свести к TypeError: can't pickle generator objects:

---------------------------------------------------------------------------
Py4JJavaError                             Traceback (most recent call last)
<ipython-input-15-7bb802f34ae5> in <module>()
      1 for iteration in range(10):
      2     # calculate the contribution of each page's outgoing link
----> 3     contribs =  linksRDD_2.map(lambda x:computeContribs(list(x[1]),1.0)).collect()
      4     contribs
      5 

3 frames
/content/spark-2.4.5-bin-hadoop2.7/python/lib/py4j-0.10.7-src.zip/py4j/protocol.py in get_return_value(answer, gateway_client, target_id, name)
    326                 raise Py4JJavaError(
    327                     "An error occurred while calling {0}{1}{2}.\n".
--> 328                     format(target_id, ".", name), value)
    329             else:
    330                 raise Py4JError(

Py4JJavaError: An error occurred while calling z:org.apache.spark.api.python.PythonRDD.collectAndServe.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 1 in stage 26.0 failed 1 times, most recent failure: Lost task 1.0 in stage 26.0 (TID 53, localhost, executor driver): org.apache.spark.api.python.PythonException: Traceback (most recent call last):
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/worker.py", line 377, in main
    process()
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/worker.py", line 372, in process
    serializer.dump_stream(func(split_index, iterator), outfile)
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/serializers.py", line 404, in dump_stream
    bytes = self.serializer.dumps(vs)
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/serializers.py", line 583, in dumps
    return pickle.dumps(obj, protocol)
TypeError: can't pickle generator objects

    at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.handlePythonException(PythonRunner.scala:456)
    at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:592)
    at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:575)
    at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:410)
    at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
    at scala.collection.Iterator$class.foreach(Iterator.scala:891)
    at org.apache.spark.InterruptibleIterator.foreach(InterruptibleIterator.scala:28)
    at scala.collection.generic.Growable$class.$plus$plus$eq(Growable.scala:59)
    at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:104)
    at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:48)
    at scala.collection.TraversableOnce$class.to(TraversableOnce.scala:310)
    at org.apache.spark.InterruptibleIterator.to(InterruptibleIterator.scala:28)
    at scala.collection.TraversableOnce$class.toBuffer(TraversableOnce.scala:302)
    at org.apache.spark.InterruptibleIterator.toBuffer(InterruptibleIterator.scala:28)
    at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:289)
    at org.apache.spark.InterruptibleIterator.toArray(InterruptibleIterator.scala:28)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$15.apply(RDD.scala:990)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$15.apply(RDD.scala:990)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
    at org.apache.spark.scheduler.Task.run(Task.scala:123)
    at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)

Driver stacktrace:
    at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1891)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1879)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1878)
    at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
    at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
    at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1878)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:927)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:927)
    at scala.Option.foreach(Option.scala:257)
    at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:927)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2112)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2061)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2050)
    at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
    at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:738)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2061)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2082)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2101)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2126)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:990)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
    at org.apache.spark.rdd.RDD.withScope(RDD.scala:385)
    at org.apache.spark.rdd.RDD.collect(RDD.scala:989)
    at org.apache.spark.api.python.PythonRDD$.collectAndServe(PythonRDD.scala:166)
    at org.apache.spark.api.python.PythonRDD.collectAndServe(PythonRDD.scala)
    at sun.reflect.GeneratedMethodAccessor42.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
    at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
    at py4j.Gateway.invoke(Gateway.java:282)
    at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
    at py4j.commands.CallCommand.execute(CallCommand.java:79)
    at py4j.GatewayConnection.run(GatewayConnection.java:238)
    at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.api.python.PythonException: Traceback (most recent call last):
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/worker.py", line 377, in main
    process()
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/worker.py", line 372, in process
    serializer.dump_stream(func(split_index, iterator), outfile)
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/serializers.py", line 404, in dump_stream
    bytes = self.serializer.dumps(vs)
  File "/content/spark-2.4.5-bin-hadoop2.7/python/lib/pyspark.zip/pyspark/serializers.py", line 583, in dumps
    return pickle.dumps(obj, protocol)
TypeError: can't pickle generator objects

    at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.handlePythonException(PythonRunner.scala:456)
    at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:592)
    at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:575)
    at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:410)
    at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
    at scala.collection.Iterator$class.foreach(Iterator.scala:891)
    at org.apache.spark.InterruptibleIterator.foreach(InterruptibleIterator.scala:28)
    at scala.collection.generic.Growable$class.$plus$plus$eq(Growable.scala:59)
    at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:104)
    at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:48)
    at scala.collection.TraversableOnce$class.to(TraversableOnce.scala:310)
    at org.apache.spark.InterruptibleIterator.to(InterruptibleIterator.scala:28)
    at scala.collection.TraversableOnce$class.toBuffer(TraversableOnce.scala:302)
    at org.apache.spark.InterruptibleIterator.toBuffer(InterruptibleIterator.scala:28)
    at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:289)
    at org.apache.spark.InterruptibleIterator.toArray(InterruptibleIterator.scala:28)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$15.apply(RDD.scala:990)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$15.apply(RDD.scala:990)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
    at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
    at org.apache.spark.scheduler.Task.run(Task.scala:123)
    at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    ... 1 more

Я не совсем знаю как решить эту ошибку; кто-нибудь может мне помочь? Большое спасибо заранее!

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