Я хочу запустить следующий код. Моя цель - создать фрейм данных .csv из файла netcdf, в котором у меня есть изолированные переменные. Я также скопировал print (my_file) ниже, чтобы вы могли увидеть структуру моего файла netcdf. Ошибка возникает, когда я запускаю pd.Series, как показано ниже:
temp_ts = pd.Series(temp, index=dtime)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/gpfs/apps/miniconda3/lib/python3.7/site-packages/pandas/core/series.py", line 305, in __init__
data = sanitize_array(data, index, dtype, copy, raise_cast_failure=True)
File "/gpfs/apps/miniconda3/lib/python3.7/site-packages/pandas/core/construction.py", line 482, in sanitize_array
raise Exception("Data must be 1-dimensional")
Exception: Data must be 1-dimensional
Ниже весь мой код:
#netcdf to .csv
import netCDF4
import pandas as pd
import numpy as np
temp_nc_file = '/gpfs/home/UDCPP/barrier_c/Test_NCO/temp_Corse_10m_201704.nc'
nc = netCDF4.Dataset(temp_nc_file, mode='r')
nc.variables.keys()
lat = nc.variables['latitude'][:]
lon = nc.variables['longitude'][:]
time_var = nc.variables['time']
dtime = netCDF4.num2date(time_var[:],time_var.units)
temp = nc.variables['TEMP'][:]
# a pandas.Series designed for time series of a 2D lat,lon grid
temp_ts = pd.Series(temp, index=dtime)
temp_ts.to_csv('temp.csv',index=True, header=True)
И, наконец, результат печати (my_file), если он полезен:
print(nc)
<class 'netCDF4._netCDF4.Dataset'>
root group (NETCDF4_CLASSIC data model, file format HDF5):
limi: 0
lima: 1100
pasi: 1
ljmi: 0
ljma: 462
pasj: 1
lkmi: 1
lkma: 60
pask: 1
global_imin: 0
global_imax: 1100
global_jmin: 0
global_jmax: 462
data_type: OCO oriented grid
format_version: 1.3.1
Conventions: CF-1.6 OCO-1.3.1 COMODO-1.0
netcdf_version: 4.1.2
product_version: 1.0
references: http://www.previmer.org/
easting: longitude
northing: latitude
grid_projection: n/a
distribution_statement: Data restrictions: for registered users only
institution: IFREMER
institution_references: http://www.ifremer.fr/
data_centre: IFREMER OCO DATA CENTER
data_centre_references: http://www.previmer.org/
title: PREVIMER MENOR 1200 forecast
creation_date: 2017-01-03T20:21:27Z
run_time: 2017-01-03T20:21:27Z
history: Tue Jun 9 18:24:38 2020: nces -O -d level,10,10 temp_Corse_201704.nc temp_Corse_10m_201704.nc
Tue Jun 9 15:41:33 2020: nces -O -d ni,565,700 -d nj,150,350 temp_201704.nc temp_Corse_201704.nc
Tue Jun 9 15:32:46 2020: ncks -O -v TEMP champs_meno_BE201704.nc temp_201704.nc
Mon Nov 6 10:27:14 2017: /appli/nco/nco-4.6.4__gcc-6.3.0/bin/ncrcat /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T0000Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T0300Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T0600Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T0900Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T1200Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T1500Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T1800Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170101T2100Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170102T0000Z.nc /home1/datawork/scoudray/DATARESU/MENOR/201701BE/MARC_F2-MARS3D-MENOR1200_20170102T0300Z.nc 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2017-01-03T20:21:27Z: creation
model_name: MARS
arakawa_grid_type: C1
source: MARS3D V10.10
area: North Western Mediterranean Sea
southernmost_latitude: 39.5000
northernmost_latitude: 44.5000
latitude_resolution: 1.082250000000000E-002
westernmost_longitude: 0.0000
easternmost_longitude: 15.9999
longitude_resolution: 1.454540000000000E-002
minimum_depth: 5.000000
maximum_depth: 3500.000
depth_resolution: n/a
forecast_range: 4-days forecast
forecast_type: forecast
operational_status: experimental
NCO: netCDF Operators version 4.9.3 (Homepage = http://nco.sf.net, Code = http://github.com/nco/nco)
start_date: 2017-01-01T00:00:00Z
stop_date: 2017-01-01T00:00:00Z
software_version: PREVIMER forecasting system v2
product_name: PREVIMER_F2-MARS3D-MENOR1200_20170101T0000Z.nc
field_type: 3-hourly
comment: Use of Meteo-France ARPEGEHR meteorological data
contact: cdoco-exploit@ifremer.fr
quality_index: 0
nco_openmp_thread_number: 1
dimensions(sizes): nj(201), ni(136), time(248), level(1)
variables(dimensions): float32 H0(nj,ni), float32 TEMP(time,level,nj,ni), float32 XE(time,nj,ni), float32 b(), float32 hc(nj,ni), float64 latitude(nj,ni), float32 level(level), float64 longitude(nj,ni), float32 ni(ni), float32 nj(nj), float32 theta(), float64 time(time)
groups:
ЗАРАНЕЕ СПАСИБО ЗА ПОМОЩЬ!