Мое решение
DELIMITER $$
DROP FUNCTION IF EXISTS SPLITCVS $$
DROP PROCEDURE IF EXISTS MIGRATE $$
CREATE FUNCTION SPLITCVS (
x VARCHAR(255),
delim VARCHAR(12),
pos INT
)
RETURNS VARCHAR(255)
RETURN REPLACE(SUBSTRING(SUBSTRING_INDEX(x, delim, pos),
LENGTH(SUBSTRING_INDEX(x, delim, pos -1)) + 1),
delim, '') $$
CREATE PROCEDURE MIGRATE ()
BEGIN
DECLARE done INT DEFAULT 0;
DECLARE id INT(11);
DECLARE csv BLOB;
DECLARE cur CURSOR FOR SELECT uid,foreigns FROM old;
DECLARE CONTINUE HANDLER FOR NOT FOUND SET done = 1;
OPEN cur;
read_loop: LOOP
FETCH cur INTO id, csv;
IF done THEN
LEAVE read_loop;
END IF;
IF LENGTH(csv) <> 0 THEN
SET @i = 0;
SET @seps = LENGTH(csv) - LENGTH(REPLACE(csv, ',', ''));
IF RIGHT(csv,1) <> ',' THEN
SET @seps = @seps + 1;
END IF;
WHILE @i < @seps DO
SET @i = @i + 1;
INSERT INTO db.newtable(uid_local,uid_foreign)
VALUES (id,SPLITCVS(csv,',',@i));
END WHILE;
END IF;
END LOOP;
CLOSE cur;
END $$
CALL MIGRATE() $$
DROP FUNCTION SPLITCVS $$
DROP PROCEDURE MIGRATE $$