Столбцы должны быть одинаковыми, поэтому примерно так:
SELECT YYYYMMDDHH, CONTAINER, Parent_Container, PROTOTYPE_ID,
Withdrawal_this_hour, NULL as Refill_this_hour,
NULL as changes_this_hour, NULL as net_amount, NULL as date
FROM `tb1`
UNION ALL
SELECT YYYYMMDDHH, CONTAINER, Parent_Container, PROTOTYPE_ID,
NULL, Refill_this_hour, NULL, NULL, NULL
FROM `tb2`
UNION ALL
SELECT YYYYMMDDHH, CONTAINER, Parent_Container, PROTOTYPE_ID,
NULL, NULL, changes_this_hour, net_amount, date
FROM `tb3`