Как интегрировать LIME с PyTorch?

Question

Используя эту модель классификации изображений mnist:

%reset -f

import torch
import torch.nn as nn
import torchvision
import torchvision.transforms as transforms
import torch
import torch.nn as nn
import torchvision
import torchvision.transforms as transforms
import torch.utils.data as data_utils
import numpy as np
import matplotlib.pyplot as plt
from sklearn.datasets import make_moons
from matplotlib import pyplot
from pandas import DataFrame
import torchvision.datasets as dset
import os
import torch.nn.functional as F
import time
import random
import pickle
from sklearn.metrics import confusion_matrix
import pandas as pd
import sklearn


trans = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))])

root = './data'
if not os.path.exists(root):
    os.mkdir(root)
train_set = dset.MNIST(root=root, train=True, transform=trans, download=True)
test_set = dset.MNIST(root=root, train=False, transform=trans, download=True)

batch_size = 64

train_loader = torch.utils.data.DataLoader(
                 dataset=train_set,
                 batch_size=batch_size,
                 shuffle=True)
test_loader = torch.utils.data.DataLoader(
                dataset=test_set,
                batch_size=batch_size,
shuffle=True)

class NeuralNet(nn.Module):
    def __init__(self):
        super(NeuralNet, self).__init__()
        self.fc1 = nn.Linear(28*28, 500)
        self.fc2 = nn.Linear(500, 256)
        self.fc3 = nn.Linear(256, 2)
    def forward(self, x):
        x = x.view(-1, 28*28)
        x = F.relu(self.fc1(x))
        x = F.relu(self.fc2(x))
        x = self.fc3(x)
        return x

num_epochs = 2
random_sample_size = 200

values_0_or_1 = [t for t in train_set if (int(t[1]) == 0 or int(t[1]) == 1)]
values_0_or_1_testset = [t for t in test_set if (int(t[1]) == 0 or int(t[1]) == 1)]

print(len(values_0_or_1))
print(len(values_0_or_1_testset))

train_loader_subset = torch.utils.data.DataLoader(
                 dataset=values_0_or_1,
                 batch_size=batch_size,
                 shuffle=True)

test_loader_subset = torch.utils.data.DataLoader(
                 dataset=values_0_or_1_testset,
                 batch_size=batch_size,
                 shuffle=False)

train_loader = train_loader_subset

# Hyper-parameters 
input_size = 100
hidden_size = 100
num_classes = 2
# learning_rate = 0.00001
learning_rate = .0001
# Device configuration
device = 'cpu'
print_progress_every_n_epochs = 1

model = NeuralNet().to(device)

# Loss and optimizer
criterion = nn.CrossEntropyLoss()
optimizer = torch.optim.Adam(model.parameters(), lr=learning_rate)  

N = len(train_loader)
# Train the model
total_step = len(train_loader)

most_recent_prediction = []
test_actual_predicted_dict = {}

rm = random.sample(list(values_0_or_1), random_sample_size)
train_loader_subset = data_utils.DataLoader(rm, batch_size=4)

for epoch in range(num_epochs):
    for i, (images, labels) in enumerate(train_loader_subset):  
        # Move tensors to the configured device
        images = images.reshape(-1, 2).to(device)
        labels = labels.to(device)

        # Forward pass
        outputs = model(images)
        loss = criterion(outputs, labels)

        # Backward and optimize
        optimizer.zero_grad()
        loss.backward()
        optimizer.step()

    if (epoch) % print_progress_every_n_epochs == 0:
        print ('Epoch [{}/{}], Step [{}/{}], Loss: {:.4f}'.format(epoch+1, num_epochs, i+1, total_step, loss.item()))


predicted_test = []
model.eval()  # eval mode (batchnorm uses moving mean/variance instead of mini-batch mean/variance)
probs_l = []

predicted_values = []
actual_values = []
labels_l = []

with torch.no_grad():
    for images, labels in test_loader_subset:
        images = images.to(device)
        labels = labels.to(device)
        outputs = model(images)
        _, predicted = torch.max(outputs.data, 1)
        predicted_test.append(predicted.cpu().numpy())

        sm = torch.nn.Softmax()
        probabilities = sm(outputs) 
        probs_l.append(probabilities)  
        labels_l.append(labels.cpu().numpy())

    predicted_values.append(np.concatenate(predicted_test).ravel())
    actual_values.append(np.concatenate(labels_l).ravel())

if (epoch) % 1 == 0:
    print('test accuracy : ', 100 * len((np.where(np.array(predicted_values[0])==(np.array(actual_values[0])))[0])) / len(actual_values[0]))

Я пытаюсь интегрировать «Локальные интерпретируемые объяснения модели и агностики для классификаторов машинного обучения»: https://marcotcr.github.io/lime/

ПоявляетсяПоддержка PyTorch не включена, поскольку она не упоминается в документации и в следующем руководстве:

https://marcotcr.github.io/lime/tutorials/Tutorial%20-%20images.html

С моим обновленным кодом для PyTorch:

from lime import lime_image
import time

explainer = lime_image.LimeImageExplainer()
explanation = explainer.explain_instance(images[0].reshape(28,28), model(images[0]), top_labels=5, hide_color=0, num_samples=1000)

Причины ошибки:

/opt/conda/lib/python3.6/site-packages/skimage/color/colorconv.py in gray2rgb(image, alpha)
    830     is_rgb = False
    831     is_alpha = False
--> 832     dims = np.squeeze(image).ndim
    833 
    834     if dims == 3:

AttributeError: 'Tensor' object has no attribute 'ndim'

Так что здесь ожидается объект тензорного потока?

Как интегрировать LIME с классификацией изображений PyTorch?