Tidyverse не устанавливается на RStudio, установленном через Anaconda - PullRequest
0 голосов
/ 31 января 2020

У меня есть R через Анаконду, и я пытаюсь загрузить Tidyverse. Тем не менее, я продолжаю получать сообщение об ошибке при попытке загрузить библиотеку, потому что консоль говорит, что нет пакета с именем tidyverse. Я попытался использовать conda вместо tidyverse с conda install -c r r-tidyverse, но в последний раз, когда я пытался установить tidyverse, я получил следующий вывод:

also installing the dependencies ‘fs’, ‘ggplot2’, ‘modelr’, ‘reprex’, ‘rvest’

trying URL 'https://cran.rstudio.com/src/contrib/fs_1.3.1.tar.gz'
Content type 'application/x-gzip' length 812680 bytes (793 KB)
==================================================
downloaded 793 KB

trying URL 'https://cran.rstudio.com/src/contrib/ggplot2_3.2.1.tar.gz'
Content type 'application/x-gzip' length 3204655 bytes (3.1 MB)
==================================================
downloaded 3.1 MB

trying URL 'https://cran.rstudio.com/src/contrib/modelr_0.1.5.tar.gz'
Content type 'application/x-gzip' length 121130 bytes (118 KB)
==================================================
downloaded 118 KB

trying URL 'https://cran.rstudio.com/src/contrib/reprex_0.3.0.tar.gz'
Content type 'application/x-gzip' length 1052597 bytes (1.0 MB)
==================================================
downloaded 1.0 MB

trying URL 'https://cran.rstudio.com/src/contrib/rvest_0.3.5.tar.gz'
Content type 'application/x-gzip' length 1129355 bytes (1.1 MB)
==================================================
downloaded 1.1 MB

trying URL 'https://cran.rstudio.com/src/contrib/tidyverse_1.3.0.tar.gz'
Content type 'application/x-gzip' length 712837 bytes (696 KB)
==================================================
downloaded 696 KB

* installing *source* package ‘fs’ ...
** package ‘fs’ successfully unpacked and MD5 sums checked
** libs
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c error.cc -o error.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c dir.cc -o dir.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c utils.cc -o utils.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c link.cc -o link.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c path.cc -o path.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c file.cc -o file.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c fs.cc -o fs.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c id.cc -o id.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c unix/getmode.cc -o unix/getmode.o
x86_64-apple-darwin13.4.0-clang++  -I"/anaconda3/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/anaconda3/lib/R/library/Rcpp/include" -D_FORTIFY_SOURCE=2 -mmacosx-version-min=10.9 -I/anaconda3/include   -fPIC  -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -stdlib=libc++ -fvisibility-inlines-hidden  -fmessage-length=0 -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -c RcppExports.cpp -o RcppExports.o
cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4
(cd libuv \
    && touch aclocal.m4 \
    && touch -r aclocal.m4 configure Makefile.in \
&& CC="x86_64-apple-darwin13.4.0-clang" CFLAGS="-march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -I/anaconda3/include -fdebug-prefix-map==/usr/local/src/conda/- -fdebug-prefix-map==/usr/local/src/conda-prefix  -fPIC " AR="x86_64-apple-darwin13.4.0-ar" RANLIB="x86_64-apple-darwin13.4.0-ranlib" LDFLAGS="-Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/anaconda3/lib -L/anaconda3/lib" ./configure --quiet)
configure: error: in `/private/var/folders/bj/09qhd4ys13qds2nvsj0x7_3m0000gn/T/RtmpcmmGfg/R.INSTALL60531833e185/fs/src/libuv':
configure: error: C compiler cannot create executables
See `config.log' for more details
make: *** [Makevars:32: libuv/Makefile] Error 77
ERROR: compilation failed for package ‘fs’
* removing ‘/anaconda3/lib/R/library/fs’
Warning in install.packages :
  installation of package ‘fs’ had non-zero exit status
* installing *source* package ‘ggplot2’ ...
** package ‘ggplot2’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ggplot2)
* installing *source* package ‘modelr’ ...
** package ‘modelr’ successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded
* DONE (modelr)
* installing *source* package ‘rvest’ ...
** package ‘rvest’ successfully unpacked and MD5 sums checked
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rvest)
ERROR: dependency ‘fs’ is not available for package ‘reprex’
* removing ‘/anaconda3/lib/R/library/reprex’
Warning in install.packages :
  installation of package ‘reprex’ had non-zero exit status
ERROR: dependency ‘reprex’ is not available for package ‘tidyverse’
* removing ‘/anaconda3/lib/R/library/tidyverse’
Warning in install.packages :
  installation of package ‘tidyverse’ had non-zero exit status

The downloaded source packages are in
    ‘/private/var/folders/bj/09qhd4ys13qds2nvsj0x7_3m0000gn/T/Rtmpp9nJs7/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
> library(tidyverse)
Error in library(tidyverse) : there is no package called ‘tidyverse’
> 
``` <br>
Does anyone know what's going on?
...