Итак, я пытался получить Biograkn сценарий для работы BLAST, следуя инструкциям этой серии видео. Мне удалось загрузить схему, но после этого нам нужно выполнить python migrate.py, чтобы загрузить в нее данные. Я выполнил команду и получаю следующую ошибку: traceback
Traceback (most recent call last):
File "/home/aditya/anaconda3/envs/RD/lib/python3.7/site-packages/grakn/service/Session/TransactionService.py", line 161, in send
response = next(self._response_iterator)
File "/home/aditya/anaconda3/envs/RD/lib/python3.7/site-packages/grpc/_channel.py", line 364, in __next__
return self._next()
File "/home/aditya/anaconda3/envs/RD/lib/python3.7/site-packages/grpc/_channel.py", line 358, in _next
raise self
grpc._channel._Rendezvous: <_Rendezvous of RPC that terminated with:
status = StatusCode.INVALID_ARGUMENT
details = "GraqlSemanticException-label 'database' not found. Please check server logs for the stack trace."
debug_error_string = "{"created":"@1582269484.666990683","description":"Error received from peer","file":"src/core/lib/surface/call.cc","file_line":1017,"grpc_message":"GraqlSemanticException-label 'database' not found. Please check server logs for the stack trace.","grpc_status":3}"
>
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "migrate.py", line 92, in <module>
init(data_path="uniprot-asthma-proteins.fasta")
File "migrate.py", line 23, in init
session, q_get_database, q_insert_database, "$db"
File "/home/aditya/Projects/RD/biograkn/blast/util.py", line 14, in insert_if_non_existent
found_list = list(read_transaction.query(get_query))
File "/home/aditya/anaconda3/envs/RD/lib/python3.7/site-packages/grakn/client.py", line 131, in query
return self._tx_service.query(query, infer)
File "/home/aditya/anaconda3/envs/RD/lib/python3.7/site-packages/grakn/service/Session/TransactionService.py", line 49, in query
response = self._communicator.send(request)
File "/home/aditya/anaconda3/envs/RD/lib/python3.7/site-packages/grakn/service/Session/TransactionService.py", line 165, in send
raise GraknError("Server/network error: {0}\n\n generated from request: {1}".format(e, request))
grakn.exception.GraknError.GraknError: Server/network error: <_Rendezvous of RPC that terminated with:
status = StatusCode.INVALID_ARGUMENT
details = "GraqlSemanticException-label 'database' not found. Please check server logs for the stack trace."
debug_error_string = "{"created":"@1582269484.666990683","description":"Error received from peer","file":"src/core/lib/surface/call.cc","file_line":1017,"grpc_message":"GraqlSemanticException-label 'database' not found. Please check server logs for the stack trace.","grpc_status":3}"
>
generated from request: query_req {
query: "match $db isa database, has name \"uniprot\"; get $db;"
}
, теперь не понятно, почему загрузка невозможна. Отсюда просьба о помощи.